equal contribution

* corresponding author

Tiberti M, Pandini A, Fraternali F, Fornili A

"In silico identification of rescue sites by double force scanning"

Bioinformatics doi:10.1093/bioinformatics/btx515

PubMed   URL   DFS


Pernigo S, Fukuzawa A, Beedle AEM, Holt M, Round A, Pandini A, Garcia-Manyes S, Gautel M, Steiner RA

"Structural trans-complementation provides isoform-specific mechanical protection to the myomesin-dependent integration of obscurin-like-1 at the muscle M-band"

Structure 25 (1):107-120, 2017

PubMed   URL


Pandini A, Morcos F, Khan S

"The gearbox of the bacterial flagellar motor switch"

Structure 24 (7):1209-1220, 2016

PubMed   URL


Pandini A, Fornili A

"Using Local States to Drive the Sampling of Global Conformations in Proteins"

J Chem Theory Comput 12 (3):1368–1379, 2016

PubMed   URL   CVSA


Pandini A, Kleinjung J, Rasool S, Khan S

"Coevolved mutations reveal distinct architectures for two core proteins in the bacterial flagellar motor"

PLOS ONE 10(11):e0142407, 2015

PubMed   URL


Pandini A, Kleinjung J, Taylor WR, Junge W, Khan S

"The phylogenetic signature underlying ATP Synthase c-ring compliance"

Biophys J 109(5):975-987, 2015

Pubmed  URL


Chung SS, Pandini A, Annibale A, Coolen ACC, Thomas NS, Fraternali F

"Bridging Topological and Functional Information in Protein Interaction Networks by Short Loops Profiling"

Sci Rep 5:8540, 2015

PubMed  URL


Pernigo S, Fukuzawa A, Pandini A, Holt M, Kleinjung J, Gautel M, Steiner RA

"The Crystal Structure of the Human Titin:Obscurin Complex Reveals a Conserved yet Specific Muscle M-Band Zipper Module"

J Mol Biol 427(4):718-736, 2015

PubMed   URL


Buffa P, Romano C, Pandini A, Massimino M, Tirrò E, Di Raimondo F, Manzella L, Fraternali F, Vigneri PG

"BCR-ABL residues interacting with ponatinib are critical to preserve the tumorigenic potential of the oncoprotein"

FASEB J 28(3):1221–1236, 2014

PubMed   URL


Fornili A, Pandini A, Lu H-C, Fraternali F

"Specialized Dynamical Properties of Promiscuous Residues Revealed by Simulated Conformational Ensembles"

J Chem Theory Comput 9(12):5127-5147, 2013

PubMed   URL


Pandini A*, Fornili A, Fraternali F, Kleinjung J

"GSATools: analysis of allosteric communication and functional local motions using a Structural Alphabet"

Bioinformatics 29(16):2053-2055, 2013

PubMed   URL   GSATools


Pandini A*, Fraccalvieri D, Bonati L

"Artificial Neural Networks for Efficient Clustering of Conformational Ensembles and their Potential for Medicinal Chemistry"

Curr Top Med Chem 13(5):642-51, 2013

PubMed   URL


Pandini A*, Fornili A, Fraternali F, Kleinjung J

"Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics"

FASEB J 26(2):868-81, 2012

PubMed   URL


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